************************************************************* Omega3P ACE3P Codes Source Date: Mon Mar 6 23:26:49 2023 -0800 ACE3P Codes Source Branch: master ACE3P Codes Source Tag: 503652f41066a31de4a9b7088dd1fd7572ada43a Support Lib Source Date: Fri Dec 2 09:43:53 2022 -0800 Support Lib Source Branch: master Support Lib Source Tag: 2f7bd8bf8ec6eb3646dc05e32622a4475531a105 Compilation Date: Mon 06 Mar 2023 11:38:55 PM PST ************************************************************* Copyright 2023, Stanford University Authors make no representations or warranties, expressed or implied. By way of example, but not limitation, authors make no representatinos or warranties of merchantibility or fitness for any particular purpose or that the use of the software componentns of documentation will not infringe any patents, copyrights, trademarks or other rights. The Authors shall not be held liable for any liability nor for any direct, indirect or consequential damages with respect to any claim by users or any third party on account of or arising from the use of this software. ************************************************************* Advanced Computations Department SLAC National Accelerator Laboratory https://slacportal.slac.stanford.edu/sites/ard_public/acd/Pages/Default.aspx Contact: ace3p@slac.stanford.edu Thank you for citing ACE3P when publishing related results. ************************************************************* Starting master process on nid006472 Number of MPI processes: 16 Number of compute nodes: 1 Number of processes per node: 16 Data precision: 64 bits Compiler: 11.2.0 20210728 (Cray Inc.) Boundary conditions: 0 = INTERIOR 1 = ELECTRIC 2 = MAGNETIC 3 = MAGNETIC 4 = MAGNETIC 5 = ELECTRIC 6 = EXTERIOR Read Mesh: /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/RfGunVacuum.ncdf Time for reading the model: 0.04962352199981979 Using curved quadratic tetrahedrons Setting global vector finite element basis order to p=2 Partitioning Method: parmetis Setup: Max: 0.001, Sum: 0.021, Balance: 1.003 Matching: Max: 0.003, Sum: 0.045, Balance: 1.001 Contraction: Max: 0.002, Sum: 0.028, Balance: 1.001 InitPart: Max: 0.004, Sum: 0.071, Balance: 1.000 Project: Max: 0.000, Sum: 0.001, Balance: 1.372 Initialize: Max: 0.001, Sum: 0.009, Balance: 1.063 K-way: Max: 0.004, Sum: 0.070, Balance: 1.014 Remap: Max: 0.000, Sum: 0.001, Balance: 1.002 Total: Max: 0.017, Sum: 0.266, Balance: 1.000 *********************************************************** * Total Number of Elements read: 83124 * Total Number of Elements used: 83124 * Total Number of DOFs: 512188 *********************************************************** Time for setting up finite element framework: 0.1868501290000495 /********************************/ /* input parameters, KVC syntax */ /********************************/ Mesh : { MeshCoords : 16207 File : /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/RfGunVacuum.ncdf ReplicatedElementDistribution : { total : 31438 stddev : 624.18970139961 min : 762 max : 3114 average : 1964.875 } ElementDistribution : { total : 83124 stddev : 208.09597144907 min : 4633 max : 5329 average : 5195.25 } } /********************************/ Checking Mesh Quality: TETRAHEDRAL ELEMENTS: number = 83124 INVERTED SECOND-ORDER ELEMENTS: number = 0 <- GOOD! ASPECT RATIO: min = 1.01091956145293 max = 2.961829448288079 <- GREAT average = 1.606717094514778 std dev = 0.2084361994342569 SHAPE MEASURE: min = 0.09935760756174961 max = 1.053730198992234 average = 0.7966106827158106 std dev = 0.1113882227458515 ELEMENT VOLUME: min = 4.811250772109094e-12 max = 7.952832226415291e-09 average = 1.115409005911269e-09 std dev = 1.271536331126446e-09 BOUNDING BOX: min = (-8.881784197001253e-18, -1.830672454394536e-18, -0.04749950000000002) max = (0.04309442000000002, 0.0762024, 0.026543) EDGE LENGTH: min = 0.0002311814261492942 max = 0.005330631298449565 average = 0.001886180862705883 std dev = 0.00103115688202113 Time for checking the mesh quality: 0.02469512700008636 Time for save/load ComputationalMesh: 0.001253903999895556 Total Volume of the structure is : 9.271725820736833e-05 Calling real solver No. Sum Average Max Min Std_dev Diagonal: 20353536 1.27e+06 1335552 1164816 5.09e+04 Offdiagonal: 955448 5.97e+04 93660 22892 1.93e+04 Nonlocal v: 109866 6.87e+03 10688 2374 2.22e+03 Number of Grad DOFs: 92661 ********************************************************** ARPACK Loop: Shift = 3.443772023135082e+03 ********************************************************** factorizing the matrix using MUMPS ... Using ParMETIS for ordering... Use 16 processors to do parallel reordering (ParMetis) Partition of Processors: 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 Processor 0: 0, 28852 Processor 1: 28852, 62000 Processor 2: 62000, 94454 Processor 3: 94454, 127066 Processor 4: 127066, 158000 Processor 5: 158000, 190566 Processor 6: 190566, 220238 Processor 7: 220238, 253152 Processor 8: 253152, 284022 Processor 9: 284022, 315744 Processor 10: 315744, 348176 Processor 11: 348176, 380920 Processor 12: 380920, 413282 Processor 13: 413282, 446312 Processor 14: 446312, 479378 Processor 15: 479378, 512188 total: 512188 16 Generate ordering using parmetis... Finished generating ordering using parmetis Analysis step: 0.762548 seconds Maximal per-core estimated memory 697 MB Aggregated estimated memory 8388 MB Maximal per-core estimated memory if OOC 481MB Aggregated estimated memory if OOC 6184MB Factorization step: 3.0727 seconds Memory usage: used mem per MPI process: min: 4.4008e+02 MB, max: 6.6105e+02 MB, avg: 5.5638e+02 MB, stddev: 6.0039e+01 MB, total: 8.9021e+03 MB used mem per node in GB : min: 3.4501e+01 GB, max: 3.4501e+01 GB, avg: 3.4501e+01 GB, stddev: 0.0000e+00 GB, total: 3.4501e+01 GB used mem per node in % : min: 6.8558e+00 %, max: 6.8558e+00 %, avg: 6.8558e+00 %, stddev: 9.1731e-16 % ncv=6 nev=1 Linear Solver Preparation Time: 5.2545e+00 Solver Time: 8.5805e-01 Number of converged eigenpairs = 1 Eigenvalue: 3.5763508129829802e+03 Frequency: 2.8533883988524013e+09 Residual: 2.4178709202830793e-10 ********************************************************** Total number of OP*x operations: 10 Total number of B*x operations if BMAT='G': 29 Total number of steps of re-orthogonalization: 9 ********************************************************** COMMIT MODE: 0 FREQ = 2.8533883988524013e+09 k= 5.9802598714294852e+01 norm(v[0]) = 4.0760965649256462e+01 Number of TriSolve: 10. Average time for one TriSolv: 0.0865124 Setup: Max: 0.001, Sum: 0.017, Balance: 1.003 Matching: Max: 0.002, Sum: 0.035, Balance: 1.001 Contraction: Max: 0.001, Sum: 0.020, Balance: 1.001 InitPart: Max: 0.004, Sum: 0.058, Balance: 1.000 Project: Max: 0.000, Sum: 0.001, Balance: 1.378 Initialize: Max: 0.001, Sum: 0.008, Balance: 1.060 K-way: Max: 0.004, Sum: 0.060, Balance: 1.000 Remap: Max: 0.000, Sum: 0.001, Balance: 1.011 Total: Max: 0.013, Sum: 0.201, Balance: 1.000 ************************************************************* Tem3P ACE3P Codes Source Date: Mon Mar 6 23:26:49 2023 -0800 ACE3P Codes Source Branch: master ACE3P Codes Source Tag: 503652f41066a31de4a9b7088dd1fd7572ada43a Support Lib Source Date: Fri Dec 2 09:43:53 2022 -0800 Support Lib Source Branch: master Support Lib Source Tag: 2f7bd8bf8ec6eb3646dc05e32622a4475531a105 Compilation Date: Mon 06 Mar 2023 11:38:55 PM PST ************************************************************* Copyright 2023, Stanford University Authors make no representations or warranties, expressed or implied. By way of example, but not limitation, authors make no representatinos or warranties of merchantibility or fitness for any particular purpose or that the use of the software componentns of documentation will not infringe any patents, copyrights, trademarks or other rights. The Authors shall not be held liable for any liability nor for any direct, indirect or consequential damages with respect to any claim by users or any third party on account of or arising from the use of this software. ************************************************************* Advanced Computations Department SLAC National Accelerator Laboratory https://slacportal.slac.stanford.edu/sites/ard_public/acd/Pages/Default.aspx Contact: ace3p@slac.stanford.edu Thank you for citing ACE3P when publishing related results. ************************************************************* Starting master process on nid006472 Number of MPI processes: 16 Number of compute nodes: 1 Number of processes per node: 16 Data precision: 64 bits Compiler: 11.2.0 20210728 (Cray Inc.) Beginning run at Sat Mar 11 14:53:25 2023 --------------------------------- Entering ThermoElasticProblem::solve()... --------------------------------- In ThermoElasticProblem::solve(): begining tem3p iter 0 with 'runThermostaticProblem' = 1 with 'runThermoTransientProblem' = 0 with 'runElasticProblem' = 1 1 In StaticProblem::readKvcParameters1() of ThermostaticProblem, rank 0: instantiating ScalarDiscreteDomain... 2 In StaticProblem::readKvcParameters1() of ThermostaticProblem, rank 0: setting up ScalarDiscreteDomain... Read Mesh: RfGunBody.ncdf Check Mesh: RfGunBody.ncdf Time for read model: 0.04009315199982666 Time for setBasisOrder: 0.007313972000247304 Time for making right-orientation and calculating Adjacency: 0.08057344100006958 Partitioning Method: PARMETIS Setup: Max: 0.002, Sum: 0.039, Balance: 1.002 Matching: Max: 0.005, Sum: 0.077, Balance: 1.000 Contraction: Max: 0.003, Sum: 0.051, Balance: 1.000 InitPart: Max: 0.004, Sum: 0.056, Balance: 1.000 Project: Max: 0.000, Sum: 0.002, Balance: 1.730 Initialize: Max: 0.001, Sum: 0.015, Balance: 1.048 K-way: Max: 0.006, Sum: 0.104, Balance: 1.002 Remap: Max: 0.000, Sum: 0.001, Balance: 1.002 Total: Max: 0.022, Sum: 0.349, Balance: 1.000 Time for partitioning mesh: 0.07195291299967721 Time for replicating remote meshes: 0.01989548599976843 Time for numberingHierarchical: 0.1655464119999124 *********************************************************** * Total Number of Elements read: 229035 * Total Number of Elements used: 229035 * Total Number of DOFs: 337804 *********************************************************** Time for numbering remote nodes: 0.003500390000226616 Time for numbering remote edges: 0.008915444999729516 Time for numbering remote faces: 0.01336482100032299 Time for numbering remote volumes: 0.0009816209999371495 Time for numbering DOF entities: 0.1924188809998668 Time for set model: 0.3690928759997405 Time for read midpoints: 0.00795454500030246 Time for creating higher-order elements: 0.01025465300017459 Problem Name: ThermostaticProblem loading RF solution for TEM3P... Omega3P directory name: omega3p_results Boundary conditions: 0 = INTERIOR 1 = ELECTRIC 2 = MAGNETIC 3 = MAGNETIC 4 = MAGNETIC 5 = ELECTRIC 6 = EXTERIOR Read Mesh: /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/RfGunVacuum.ncdf Time for reading the model: 0.09417208300010316 Using curved quadratic tetrahedrons Setting global vector finite element basis order to p=2 Partitioning Method: parmetis *********************************************************** * Total Number of Elements read: 83124 * Total Number of Elements used: 83124 * Total Number of DOFs: 512188 *********************************************************** Time for setting up finite element framework: 1.223409560000164 /********************************/ /* input parameters, KVC syntax */ /********************************/ Mesh : { File : /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/RfGunVacuum.ncdf ReplicatedElementDistribution : { total : 0 min : 0 average : 0.0 stddev : 0.0 max : 0 } MeshCoords : 16207 ElementDistribution : { total : 83124 min : 83124 average : 83124.0 stddev : 0.0 max : 83124 } } /********************************/ In StaticProblem::readKvcParameters1() of ThermostaticProblem, rank 0: setting map of boundaries... EM frequency : (2853388398.852401,0) Parameter used in computing gradient: /********************************/ /* input parameters, KVC syntax */ /********************************/ SymmetryFactor : 1.0 Trajectory : { EndPoint : 0.0001 , 0.0001 , 0.017018 TrajectoryMethod : 1 NumberOfPointsPerSegment : 2000 StartPoint : 0.0001 , 0.0001 , -0.017018 } /********************************/ Number of sampled points: 2001 Vr, Vi, and Voltage on the line1: -3.202134019277217 5.130237752476776 6.047561630471444 Scaling Info : Scaling Factor : Target Gradient : EM gradient : Effective Length : Duty Factor : Symmety Scaling Info : 41050781.14681887 : 60000000 : 177.6813265504597 : 0.034036 : 0.00036 : 0 The scaling factor is 41050781.14681887 EM Heating Boundary 6 sigmaSqrt = 7615.773105863908 In StaticProblem::readKvcParameters1() of ThermostaticProblem, rank 0: map of boundaries set succesfully In StaticProblem::readKvcParameters1() of ThermostaticProblem, rank 0: setting linear solver... Leaving StaticProblem::readKvcParameters1() of ThermostaticProblem Entering StaticProblem::instantiateMatrix() of ThermostaticProblem Entering assembleMatrix(). Time for assembling thermal matrix: 0.2783120640001471 ThermostaticProblem::computeRHS Time for assembling RHS: 2.11128 In ThermostaticProblem::solveLinearSystem(), tem3p iter 0: solving Ax = b with ||b||_2 = 26.15985519308913 In ThermostaticProblem::solveLinearSystem(), tem3p iter 0: solved Ax = b with ||x||_2 = 14323.44863842977, after 1234 iterations 1 In StaticProblem::readKvcParameters1() of ElasticProblem, rank 0: instantiating ScalarDiscreteDomain... 2 In StaticProblem::readKvcParameters1() of ElasticProblem, rank 0: setting up ScalarDiscreteDomain... Read Mesh: RfGunBody.ncdf Time for read model: 0.03054097100039144 Time for setBasisOrder: 0.006184748000123363 Time for making right-orientation and calculating Adjacency: 0.09763487899999745 Partitioning Method: PARMETIS Setup: Max: 0.002, Sum: 0.036, Balance: 1.001 Matching: Max: 0.004, Sum: 0.071, Balance: 1.000 Contraction: Max: 0.003, Sum: 0.045, Balance: 1.001 InitPart: Max: 0.003, Sum: 0.050, Balance: 1.000 Project: Max: 0.000, Sum: 0.002, Balance: 1.842 Initialize: Max: 0.001, Sum: 0.015, Balance: 1.031 K-way: Max: 0.006, Sum: 0.102, Balance: 1.000 Remap: Max: 0.000, Sum: 0.001, Balance: 1.002 Total: Max: 0.020, Sum: 0.324, Balance: 1.000 Time for partitioning mesh: 0.08246546299960755 Time for replicating remote meshes: 0.02270723899982841 Time for numberingHierarchical: 0.159927413999867 *********************************************************** * Total Number of Elements read: 229035 * Total Number of Elements used: 229035 * Total Number of DOFs: 1013412 *********************************************************** Time for numbering remote nodes: 0.002147114000308648 Time for numbering remote edges: 0.007858971000132442 Time for numbering remote faces: 0.01142940500039913 Time for numbering remote volumes: 0.0007405559999824618 Time for numbering DOF entities: 0.1821941349999179 Time for set model: 0.3892272819998652 Time for read midpoints: 0.007164934999764228 Time for creating higher-order elements: 0.01150815699975283 Problem Name: ElasticProblem loading RF solution for TEM3P... In StaticProblem::readKvcParameters1() of ElasticProblem, rank 0: setting map of boundaries... box 1 : 0.0001 box 0.0001 : 0.0001 box 0.0001 : 0.0001 box -0.017018 : 0.017018 Parameter used in computing gradient: /********************************/ /* input parameters, KVC syntax */ /********************************/ Trajectory : { EndPoint : 0.0001 , 0.0001 , 0.017018 TrajectoryMethod : 1 NumberOfPointsPerSegment : 2000 StartPoint : 0.0001 , 0.0001 , -0.017018 } GradientDirection : 0.0 , 0.0 , 1.0 SymmetryFactor : 1.0 /********************************/ Number of sampled points: 2001 Vr, Vi, and Voltage on the line1: -3.202134019277217 5.130237752476776 6.047561630471444 Scaling Info : Gradient Scaling Factor : Target Gradient : EM gradient : Effective Length : Duty Factor Scaling Info : 337683.2060231193 : 60000000 : 177.6813265504597 : 0.034036 : 1 The LF scaling factor is 114029947630.0524 mixed boundary count is 3 In StaticProblem::readKvcParameters1() of ElasticProblem, rank 0: map of boundaries set succesfully In StaticProblem::readKvcParameters1() of ElasticProblem, rank 0: setting linear solver... Leaving StaticProblem::readKvcParameters1() of ElasticProblem Reference Temperature is 25 EM Mesh input directory: omega3p_results Entering StaticProblem::instantiateMatrix() of ElasticProblem Entering assembleMatrix(). Entering assemblePatternValue(). Time for assembling elastic matrix: 1.68977 Leaving ElasticProblem::constructor() Time for assembling RHS: 12.3462 Entering StaticProblem::setSolver() of ElasticProblem Memory usage: used mem per MPI process: min: 373.6 MB, max: 407.8 MB, avg: 390.5 MB, stddev: 9.148 MB, total: 6248 MB used mem per node in GB : min: 32.44 GB, max: 32.44 GB, avg: 32.44 GB, stddev: 0 GB, total: 32.44 GB used mem per node in % : min: 6.447 %, max: 6.447 %, avg: 6.447 %, stddev: 2.752e-15 % Leaving StaticProblem::setSolver() of ElasticProblem Deformed Vacuum Mesh Calculation ... Boundary conditions: 0 = INTERIOR 1 = ELECTRIC 2 = MAGNETIC 3 = MAGNETIC 4 = MAGNETIC 5 = ELECTRIC 6 = EXTERIOR Read Mesh: /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/RfGunVacuum.ncdf Time for reading the model: 0.02153 Using curved quadratic tetrahedrons Setting global vector finite element basis order to p=2 Partitioning Method: parmetis Setup: Max: 0.001, Sum: 0.017, Balance: 1.004 Matching: Max: 0.003, Sum: 0.041, Balance: 1.001 Contraction: Max: 0.001, Sum: 0.022, Balance: 1.001 InitPart: Max: 0.003, Sum: 0.055, Balance: 1.000 Project: Max: 0.000, Sum: 0.001, Balance: 1.434 Initialize: Max: 0.001, Sum: 0.009, Balance: 1.063 K-way: Max: 0.004, Sum: 0.070, Balance: 1.000 Remap: Max: 0.000, Sum: 0.001, Balance: 1.014 Total: Max: 0.014, Sum: 0.219, Balance: 1.000 *********************************************************** * Total Number of Elements read: 83124 * Total Number of Elements used: 83124 * Total Number of DOFs: 512188 *********************************************************** Time for setting up finite element framework: 0.1493 /********************************/ /* input parameters, KVC syntax */ /********************************/ Mesh : { File : /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/RfGunVacuum.ncdf ReplicatedElementDistribution : { total : 31438 min : 762 average : 1964.875 stddev : 624.18970139961 max : 3114 } MeshCoords : 16207 ElementDistribution : { total : 83124 min : 4633 average : 5195.25 stddev : 208.09597144907 max : 5329 } } /********************************/ Vacuum Mesh Exterior ID : 6 Size of Multiphysics surface coord list : 4065 Size of Multiphysics surface mid coord list : 6337 E&M vacuum mesh deformation written Structural mesh deformation written Save DOF mapping to tem3p_results/OUTPUT/E/dofs.ncdf ... Done. Time for that is 3.91433640e-02 Time for misc.out: 7.45575000e-04 Distribute remote flux called Calculating the total power flow through every sideset... ===================================== Max T = 28.6 Min T = 23.12 P (SideSet 1) = 2.408e-07 P (SideSet 2) = 0.001142 P (SideSet 3) = -0.01299 P (SideSet 4) = -0.05743 P (SideSet 5) = 213.1 P (SideSet 6) = -215.6 ===================================== Temperature output file : tem3p_results/Temperature.mod Strain/Stress Max : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : -1e+09 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : Strain/Stress Min : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 1e+09 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : 0 : Save DOF mapping to tem3p_results/OUTPUT/E/dofs.ncdf ... Done. Time for that is 3.16216220e-02 Time for misc.out: 6.45824000e-04 Save DOF mapping to tem3p_results/OUTPUT/E/dofs.ncdf ... Done. Time for that is 2.39479980e-02 Time for misc.out: 3.91494000e-04 Save DOF mapping to tem3p_results/OUTPUT/E/dofs.ncdf ... Done. Time for that is 2.34881220e-02 Time for misc.out: 3.00809000e-04 Save DOF mapping to tem3p_results/OUTPUT/E/dofs.ncdf ... Done. Time for that is 2.38570420e-02 Time for misc.out: 2.97282000e-04 writing strain file tem3p_results/Strain.mod writing stress file tem3p_results/Stress.mod ===================================== Min u_x = -1.182e-06 Max u_x = 4.556e-07 Min u_y = -7.828e-07 Max u_y = 2.647e-07 Min u_z = 0 Max u_z = 3.311e-06 Max u_mag = 3.312e-06 Max u_mag block id = 1 ===================================== Displacement output file : tem3p_results/Displacement.mod --------------------------------- Leaving ThermoElasticProblem::solve() --------------------------------- Leaving StaticProblem::destructor() of ElasticProblem Leaving StaticProblem::destructor() of ThermostaticProblem Final result: total run time from timer manager 'Total run' is 5.60409118e+01 seconds Ending run at Sat Mar 11 14:54:21 2023 Total run time = 56 seconds ************************************************************* Omega3P ACE3P Codes Source Date: Mon Mar 6 23:26:49 2023 -0800 ACE3P Codes Source Branch: master ACE3P Codes Source Tag: 503652f41066a31de4a9b7088dd1fd7572ada43a Support Lib Source Date: Fri Dec 2 09:43:53 2022 -0800 Support Lib Source Branch: master Support Lib Source Tag: 2f7bd8bf8ec6eb3646dc05e32622a4475531a105 Compilation Date: Mon 06 Mar 2023 11:38:55 PM PST ************************************************************* Copyright 2023, Stanford University Authors make no representations or warranties, expressed or implied. By way of example, but not limitation, authors make no representatinos or warranties of merchantibility or fitness for any particular purpose or that the use of the software componentns of documentation will not infringe any patents, copyrights, trademarks or other rights. The Authors shall not be held liable for any liability nor for any direct, indirect or consequential damages with respect to any claim by users or any third party on account of or arising from the use of this software. ************************************************************* Advanced Computations Department SLAC National Accelerator Laboratory https://slacportal.slac.stanford.edu/sites/ard_public/acd/Pages/Default.aspx Contact: ace3p@slac.stanford.edu Thank you for citing ACE3P when publishing related results. ************************************************************* Starting master process on nid006472 Number of MPI processes: 16 Number of compute nodes: 1 Number of processes per node: 16 Data precision: 64 bits Compiler: 11.2.0 20210728 (Cray Inc.) Boundary conditions: 0 = INTERIOR 1 = ELECTRIC 2 = MAGNETIC 3 = MAGNETIC 4 = MAGNETIC 5 = ELECTRIC 6 = EXTERIOR Read Mesh: /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/tem3p_results/DeformedVacuumMesh.ncdf Time for reading the model: 0.01550893900002848 Using curved quadratic tetrahedrons Setting global vector finite element basis order to p=2 Partitioning Method: parmetis Setup: Max: 0.001, Sum: 0.020, Balance: 1.002 Matching: Max: 0.003, Sum: 0.042, Balance: 1.001 Contraction: Max: 0.001, Sum: 0.023, Balance: 1.001 InitPart: Max: 0.004, Sum: 0.061, Balance: 1.000 Project: Max: 0.000, Sum: 0.001, Balance: 1.304 Initialize: Max: 0.001, Sum: 0.009, Balance: 1.055 K-way: Max: 0.004, Sum: 0.068, Balance: 1.006 Remap: Max: 0.000, Sum: 0.001, Balance: 1.010 Total: Max: 0.014, Sum: 0.230, Balance: 1.000 *********************************************************** * Total Number of Elements read: 83124 * Total Number of Elements used: 83124 * Total Number of DOFs: 512188 *********************************************************** Time for setting up finite element framework: 0.1641360669996175 /********************************/ /* input parameters, KVC syntax */ /********************************/ Mesh : { File : /pscratch/sd/l/liling/cw23/tem3p/RfGun-Coupler/tem3p_results/DeformedVacuumMesh.ncdf MeshCoords : 16207 ReplicatedElementDistribution : { min : 833 max : 3232 stddev : 599.81991741966 average : 1992.75 total : 31884 } ElementDistribution : { min : 4786 max : 5409 stddev : 198.76669741181 average : 5195.25 total : 83124 } } /********************************/ Checking Mesh Quality: TETRAHEDRAL ELEMENTS: number = 83124 INVERTED SECOND-ORDER ELEMENTS: number = 0 <- GOOD! ASPECT RATIO: min = 1.01091956145293 max = 2.96217563716609 <- GREAT average = 1.606705931135709 std dev = 0.2084338109867046 SHAPE MEASURE: min = 0.1009982399893385 <- GREAT max = 1.053720653193865 average = 0.7966093637207577 std dev = 0.1113925096713804 ELEMENT VOLUME: min = 4.801925559664106e-12 max = 7.948714425765735e-09 average = 1.115424411674247e-09 std dev = 1.271537271732371e-09 BOUNDING BOX: min = (-1.232396739081115e-11, -2.02378226065741e-12, -0.04749950000000002) max = (0.04309441282868599, 0.0762024, 0.02654631069513252) EDGE LENGTH: min = 0.000231188113739992 max = 0.005330631298449565 average = 0.001886187793379731 std dev = 0.001031165782132352 Time for checking the mesh quality: 0.02621657600002436 Time for save/load ComputationalMesh: 0.0008349079998879461 Total Volume of the structure is : 9.27185387960101e-05 Calling real solver No. Sum Average Max Min Std_dev Diagonal: 20342488 1.27e+06 1348784 1140792 6.60e+04 Offdiagonal: 966496 6.04e+04 96588 23808 1.86e+04 Nonlocal v: 111850 6.99e+03 11226 2438 2.18e+03 Number of Grad DOFs: 92661 ********************************************************** ARPACK Loop: Shift = 3.443772023135082e+03 ********************************************************** factorizing the matrix using MUMPS ... Using ParMETIS for ordering... Use 16 processors to do parallel reordering (ParMetis) Partition of Processors: 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 Processor 0: 0, 32564 Processor 1: 32564, 65242 Processor 2: 65242, 95694 Processor 3: 95694, 125942 Processor 4: 125942, 159616 Processor 5: 159616, 188796 Processor 6: 188796, 219018 Processor 7: 219018, 252214 Processor 8: 252214, 285174 Processor 9: 285174, 315708 Processor 10: 315708, 349172 Processor 11: 349172, 380864 Processor 12: 380864, 413056 Processor 13: 413056, 445204 Processor 14: 445204, 478708 Processor 15: 478708, 512188 total: 512188 16 Generate ordering using parmetis... Finished generating ordering using parmetis Analysis step: 0.667453 seconds Maximal per-core estimated memory 586 MB Aggregated estimated memory 7813 MB Maximal per-core estimated memory if OOC 406MB Aggregated estimated memory if OOC 5434MB Factorization step: 2.44313 seconds Memory usage: used mem per MPI process: min: 3.7712e+02 MB, max: 5.8877e+02 MB, avg: 5.1025e+02 MB, stddev: 5.7432e+01 MB, total: 8.1641e+03 MB used mem per node in GB : min: 3.4432e+01 GB, max: 3.4432e+01 GB, avg: 3.4432e+01 GB, stddev: 0.0000e+00 GB, total: 3.4432e+01 GB used mem per node in % : min: 6.8421e+00 %, max: 6.8421e+00 %, avg: 6.8421e+00 %, stddev: 2.7519e-15 % ncv=6 nev=1 Linear Solver Preparation Time: 4.4901e+00 Solver Time: 7.4969e-01 Number of converged eigenpairs = 1 Eigenvalue: 3.5764697018600082e+03 Frequency: 2.8534358261520338e+09 Residual: 3.7740970709743352e-11 ********************************************************** Total number of OP*x operations: 10 Total number of B*x operations if BMAT='G': 28 Total number of steps of re-orthogonalization: 8 ********************************************************** COMMIT MODE: 0 FREQ = 2.8534358261520338e+09 k= 5.9803592716993251e+01 norm(v[0]) = 4.0762688505174040e+01 Number of TriSolve: 10. Average time for one TriSolv: 0.0757133 Setup: Max: 0.001, Sum: 0.018, Balance: 1.003 Matching: Max: 0.002, Sum: 0.039, Balance: 1.001 Contraction: Max: 0.001, Sum: 0.022, Balance: 1.001 InitPart: Max: 0.004, Sum: 0.057, Balance: 1.000 Project: Max: 0.000, Sum: 0.001, Balance: 1.332 Initialize: Max: 0.001, Sum: 0.009, Balance: 1.059 K-way: Max: 0.004, Sum: 0.067, Balance: 1.001 Remap: Max: 0.000, Sum: 0.001, Balance: 1.011 Total: Max: 0.013, Sum: 0.215, Balance: 1.000