\documentclass[letterpaper]{book}
\usepackage{makeidx}
\usepackage{fancyhdr}
\usepackage{graphicx}
\usepackage{multicol}
\usepackage{float}
\usepackage{textcomp}
\usepackage{alltt}
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\usepackage[ps2pdf,
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\usepackage[pdftex,
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\usepackage{doxygen}
\makeindex
\setcounter{tocdepth}{1}
\renewcommand{\footrulewidth}{0.4pt}
\begin{document}
\begin{titlepage}
\vspace*{7cm}
\begin{center}
{\Large Reference Manual}\\
\vspace*{1cm}
{\large Generated by Doxygen 1.4.4}\\
\vspace*{0.5cm}
{\small Sun Jun 14 02:30:26 2009}\\
\end{center}
\end{titlepage}
\clearemptydoublepage
\pagenumbering{roman}
\tableofcontents
\clearemptydoublepage
\pagenumbering{arabic}
\chapter{CMX Generated Documentation }
\label{index}\hypertarget{index}{}\input{index}
\chapter{Directory Hierarchy}
\input{dirs}
\chapter{Data Structure Index}
\input{annotated}
\chapter{File Index}
\input{files}
\chapter{Directory Documentation}
\input{dir_000002}
\include{dir_000000}
\include{dir_000001}
\include{dir_000008}
\include{dir_000005}
\include{dir_000004}
\include{dir_000007}
\include{dir_000003}
\include{dir_000006}
\chapter{Data Structure Documentation}
\input{struct__LCS__ContextCPU}
\include{struct__LCS__ContextSDI}
\include{struct__LCS__Control}
\include{union__LCS__Data}
\include{union__LCS__Header}
\include{struct__LCS__HeaderCPU}
\include{struct__LCS__HeaderSDI}
\include{union__LCS__Protocol}
\include{struct__LCS__ProtocolCPU}
\include{struct__LCS__ProtocolSDI}
\include{struct__LCS__Reply}
\include{struct__LCS__Timeout}
\include{struct__LRX__Driver}
\include{struct__LRX__Engine}
\include{struct__LRX__Service}
\include{struct__LTX__Adapter}
\include{struct__LTX__Engine}
\include{struct__LTX__Service}
\include{struct__LTX__Sync}
\include{struct__LTX__Timing}
\chapter{File Documentation}
\input{LCS__configure_8c}
\include{LCS__control_8c}
\include{LCS__drvdefs_8h}
\include{LCS__msgs_8c}
\include{LCS__msgs_8h}
\include{LCS__prvdefs_8h}
\include{LCS__pubdefs_8h}
\include{LCS__utility_8c}
\include{LRX__control_8c}
\include{LRX__service_8c}
\include{LTX__adaptCPU_8c}
\include{LTX__adaptSDI_8c}
\include{LTX__control_8c}
\include{LTX__service_8c}
\include{LTX__sync_8c}
\printindex
\end{document}