\documentclass[letterpaper]{book}
\usepackage{makeidx}
\usepackage{fancyhdr}
\usepackage{graphicx}
\usepackage{multicol}
\usepackage{float}
\usepackage{textcomp}
\usepackage{alltt}
\usepackage{ifpdf}
\ifpdf
\usepackage[pdftex,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue,
            unicode
           ]{hyperref}
\else
\usepackage[ps2pdf,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue,
            unicode
           ]{hyperref}
\usepackage{pspicture}
\fi
\usepackage[utf8]{inputenc}
\usepackage{doxygen}
\makeindex
\setcounter{tocdepth}{3}
\renewcommand{\footrulewidth}{0.4pt}
\begin{document}
\begin{titlepage}
\vspace*{7cm}
\begin{center}
{\Large Reference Manual}\\
\vspace*{1cm}
{\large Generated by Doxygen 1.5.8}\\
\vspace*{0.5cm}
{\small Tue Nov 29 23:19:29 2011}\\
\end{center}
\end{titlepage}
\clearemptydoublepage
\pagenumbering{roman}
\tableofcontents
\clearemptydoublepage
\pagenumbering{arabic}
\chapter{CMX Generated Documentation}
\label{index}\hypertarget{index}{}\input{index}
\chapter{Directory Hierarchy}
\input{dirs}
\chapter{Class Index}
\input{annotated}
\chapter{File Index}
\input{files}
\chapter{Directory Documentation}
\input{dir_2ac972105c62c03f4fca39b9d1229fe7}
\include{dir_be2311a3ca8213c8ed9fa33b5ac07dbb}
\include{dir_0d6ca82c0abeffd25cfbbda7829bb87d}
\include{dir_dba7dbdd98a410453b8a0d72b38b550d}
\include{dir_ee84fdae8c5974266af70b370b642428}
\include{dir_04cdac298904142c19c696ceccb1b34e}
\include{dir_5a19b81e1f06b3e638dc8d520bf11944}
\include{dir_b4f4df9fe1e8b4fe975ec4aa707f2a3e}
\include{dir_80fd6bfab77c31d6404283ef12064616}
\include{dir_fe2dba744611e16572f8b20d0a606909}
\include{dir_2027f05d5455a175e4a04bb407f5f30c}
\chapter{Class Documentation}
\input{struct__TMR__usecs__nsecs}
\chapter{File Documentation}
\input{TMR_8c}
\include{TMR_8h}
\include{TMR_8sx-xxx-xxx_8c}
\include{TMR_8sx-xxx-xxx_8h}
\printindex
\end{document}
