\documentclass[letterpaper]{book}
\usepackage{makeidx}
\usepackage{fancyhdr}
\usepackage{graphicx}
\usepackage{multicol}
\usepackage{float}
\usepackage{textcomp}
\usepackage{alltt}
\usepackage{ifpdf}
\ifpdf
\usepackage[pdftex,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue,
            unicode
           ]{hyperref}
\else
\usepackage[ps2pdf,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue,
            unicode
           ]{hyperref}
\usepackage{pspicture}
\fi
\usepackage[utf8]{inputenc}
\usepackage{doxygen}
\makeindex
\setcounter{tocdepth}{3}
\renewcommand{\footrulewidth}{0.4pt}
\begin{document}
\begin{titlepage}
\vspace*{7cm}
\begin{center}
{\Large Reference Manual}\\
\vspace*{1cm}
{\large Generated by Doxygen 1.5.8}\\
\vspace*{0.5cm}
{\small Tue Nov 29 18:00:57 2011}\\
\end{center}
\end{titlepage}
\clearemptydoublepage
\pagenumbering{roman}
\tableofcontents
\clearemptydoublepage
\pagenumbering{arabic}
\chapter{CMX Generated Documentation}
\label{index}\hypertarget{index}{}\input{index}
\chapter{Directory Hierarchy}
\input{dirs}
\chapter{Class Index}
\input{annotated}
\chapter{File Index}
\input{files}
\chapter{Directory Documentation}
\input{dir_0d6ca82c0abeffd25cfbbda7829bb87d}
\include{dir_dba7dbdd98a410453b8a0d72b38b550d}
\include{dir_ee84fdae8c5974266af70b370b642428}
\include{dir_845379ef775b5bcb53f8b4c01656040b}
\include{dir_2f42e5202bb222a1fdf005d54662c74c}
\include{dir_429cd5bbe176797eca29ea3c7c8f6bd6}
\include{dir_5ed83a5adac9c5067372067c68694787}
\include{dir_0a02acb805dce7e24d29442e3f265aa8}
\include{dir_03c2f94110f808b727d7658810d27b5e}
\chapter{Class Documentation}
\input{union__THS__GemTableFlags}
\include{struct__THS__GemTableFlagsBf}
\chapter{File Documentation}
\input{THS_8c}
\include{THS_8h}
\include{THS__cpu_8c}
\include{THS__gem_8c}
\include{THS__lsf_8c}
\include{THS__msgs_8c}
\include{THS__msgs_8h}
\include{THS__prvdefs_8h}
\printindex
\end{document}
