\documentclass[letterpaper]{book}
\usepackage{makeidx}
\usepackage{fancyhdr}
\usepackage{graphicx}
\usepackage{multicol}
\usepackage{float}
\usepackage{textcomp}
\usepackage{alltt}
\usepackage{ifpdf}
\ifpdf
\usepackage[pdftex,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue,
            unicode
           ]{hyperref}
\else
\usepackage[ps2pdf,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue,
            unicode
           ]{hyperref}
\usepackage{pspicture}
\fi
\usepackage[utf8]{inputenc}
\usepackage{doxygen}
\makeindex
\setcounter{tocdepth}{3}
\renewcommand{\footrulewidth}{0.4pt}
\begin{document}
\begin{titlepage}
\vspace*{7cm}
\begin{center}
{\Large Reference Manual}\\
\vspace*{1cm}
{\large Generated by Doxygen 1.5.8}\\
\vspace*{0.5cm}
{\small Mon Dec 17 14:59:58 2012}\\
\end{center}
\end{titlepage}
\clearemptydoublepage
\pagenumbering{roman}
\tableofcontents
\clearemptydoublepage
\pagenumbering{arabic}
\chapter{CMX Generated Documentation}
\label{index}\hypertarget{index}{}\input{index}
\chapter{Directory Hierarchy}
\input{dirs}
\chapter{File Index}
\input{files}
\chapter{Directory Documentation}
\input{dir_84a28509c1ab867455ba6e9433ba82e4}
\include{dir_df7d637bfc6d4b3dd24071600a3621fe}
\include{dir_a833c90e1734856f6eb85c95ea014861}
\include{dir_ab73ce3aaaa7a3f46041f1d9e073f0a9}
\include{dir_49c95b5ba8195a56775a5bef835a79a7}
\include{dir_0d6ca82c0abeffd25cfbbda7829bb87d}
\include{dir_dba7dbdd98a410453b8a0d72b38b550d}
\include{dir_ee84fdae8c5974266af70b370b642428}
\include{dir_a355ad947e953384b74be1f02cd94854}
\include{dir_9a4d6f4428612b517d09758221246d47}
\include{dir_3d3c9861ba7cdaa46a4f92e46a6852c9}
\chapter{File Documentation}
\input{CMX__asBuiltPub_8h}
\include{CMX__asBuiltSpy_8c}
\include{CMX__asBuiltSpy_8h}
\include{CMX__asBuiltSym_8c}
\include{CMX__lookupPub_8h}
\include{CMX__lookupSpy_8c}
\include{CMX__lookupSpy_8h}
\printindex
\end{document}