\documentclass[letterpaper]{book}
\usepackage{makeidx}
\usepackage{fancyhdr}
\usepackage{graphicx}
\usepackage{multicol}
\usepackage{float}
\usepackage{textcomp}
\usepackage{alltt}
\ifx\pdfoutput\undefined
\usepackage[ps2pdf,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue
           ]{hyperref}
\usepackage{pspicture}
\else
\usepackage[pdftex,
            pagebackref=true,
            colorlinks=true,
            linkcolor=blue
           ]{hyperref}
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\usepackage{doxygen}
\makeindex
\setcounter{tocdepth}{1}
\renewcommand{\footrulewidth}{0.4pt}
\begin{document}
\begin{titlepage}
\vspace*{7cm}
\begin{center}
{\Large Reference Manual}\\
\vspace*{1cm}
{\large Generated by Doxygen 1.4.4}\\
\vspace*{0.5cm}
{\small Fri Nov 2 05:09:28 2007}\\
\end{center}
\end{titlepage}
\clearemptydoublepage
\pagenumbering{roman}
\tableofcontents
\clearemptydoublepage
\pagenumbering{arabic}
\chapter{CMX Generated Documentation }
\label{index}\hypertarget{index}{}\input{index}
\chapter{Directory Hierarchy}
\input{dirs}
\chapter{Data Structure Index}
\input{annotated}
\chapter{File Index}
\input{files}
\chapter{Directory Documentation}
\input{dir_000003}
\include{dir_000002}
\include{dir_000000}
\include{dir_000001}
\include{dir_000008}
\include{dir_000005}
\include{dir_000004}
\include{dir_000007}
\include{dir_000006}
\chapter{Data Structure Documentation}
\input{struct__AEM__Control}
\include{struct__ITC__QueueItem}
\include{struct__LIH__Control}
\include{struct__LIH__Database}
\include{struct__LIH__Device}
\include{struct__LIH__DifferEBM}
\include{struct__LIH__EnableLimitsAdc__Pkt}
\include{struct__LIH__EnableLimitsAdc__Prm}
\include{struct__LIH__LimitADC__Tlm}
\include{struct__LIH__LimitAlert__Tlm}
\include{struct__LIH__LimitSave}
\include{struct__LIH__LoadLimits__Pkt}
\include{struct__LIH__LoadLimits__Prm}
\include{struct__LIH__Message}
\include{struct__LIH__Noop__Pkt}
\include{struct__LIH__Packet}
\include{struct__LIH__Put}
\include{struct__LIH__SetLimitsAdc__Pkt}
\include{struct__LIH__SetLimitsAdc__Prm}
\include{struct__LIH__Source}
\include{struct__PDU__Control}
\include{struct__TEM__Control}
\chapter{File Documentation}
\input{LIH__AEM_8c}
\include{LIH__CmdCnts_8c}
\include{LIH__cmddefs_8h}
\include{LIH__command_8c}
\include{LIH__control_8c}
\include{LIH__CtdbCounts_8c}
\include{LIH__GasuCounts_8c}
\include{LIH__LatcStatus_8c}
\include{LIH__limit_8c}
\include{LIH__LimStatus_8c}
\include{LIH__Lrs0_8c}
\include{LIH__LtcData_8c}
\include{LIH__msgs_8c}
\include{LIH__msgs_8h}
\include{LIH__packet_8h}
\include{LIH__PDU_8c}
\include{LIH__prvdefs_8h}
\include{LIH__source_8h}
\include{LIH__TEM_8c}
\include{LIH__tlmdefs_8h}
\include{LIH__TopCpu_8c}
\printindex
\end{document}