/nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/pyfits/__init__.py:22: PyFITSDeprecationWarning: PyFITS is deprecated, please use astropy.io.fits
  PyFITSDeprecationWarning)  # noqa

Likelihood Analysis Tool
Support Contact: Daniel Kocevski (daniel.kocevski@nasa.gov)


Waiting 2 seconds before starting...
Proceeding.

Importing modules...
This is make3FGLxml version 01r0.
The default diffuse model files and names are for pass 8 and assume you have v10r00p05 of the Fermi Science Tools or higher.
This is make4FGLxml version 01r04.
The default diffuse model files and names are for pass 8 and 4FGL and assume you have v11r5p3 of the Fermi Science Tools or higher.

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

/nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/matplotlib/cbook/deprecation.py:106: MatplotlibDeprecationWarning: The mpl_toolkits.axes_grid module was deprecated in version 2.1. Use mpl_toolkits.axes_grid1 and mpl_toolkits.axisartist provies the same functionality instead.
  warnings.warn(message, mplDeprecation, stacklevel=1)

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

number of points = 7446
number of fields = 31
RA_SUN column already exists. File will not be modified.
Done.


Performing analysis on: 4FGL_J1139.0+4033_daily_bin1580
RA = 174.764, Dec = 40.5617
tmin = 648864001, tmax = 649123201
emin = 100.0, emax = 100000.0
irfs = P8R3_SOURCE_V2
ROI = 12
zmax = 90

Fitting strategies:
Fix sources to their catalog values = True
Leave variable source normalizations free = True
Perform pre-fit where ALL sources are frozen to catalog values = False
Perform secondary fit with a free spectral index = True
Remove all catalog sources = False
Remove weak (TS < 2) catalog sources = False
Freeze Galactic component = False

Likelihood fit parameters:
Statistic: UNBINNED
Optimizer: MINUIT

Catalog: 4FGL

Repository Job = True

LAT data Source:
Data catalog

Updating database...

UPDATE lightcurve_data_v2 SET job_id='991376', job_status='RUN', time_executed='2021-09-04 07:17:25.518972', time_epoch_executed='1630765045.52' WHERE source_name='4FGL J1139.0+4033' and cadence='daily' and bin_id='1580'

Database successfully updated.
Done.

Creating custom output directory:
/scratch/kocevski/991376

Creating custom pfile directory:
/scratch/kocevski/991376/pfiles/

Retrieving the FT1 file...

Issuing command:
/afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStop>=648864001.0 && nMetStart<649123201.0' /Data/Flight/Reprocess/P305

Issuing command:
/afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStart>564945418 && nMetStop>=648864001.0 && nMetStart<649123201.0' /Data/Flight/Level1/LPA

Retrieving 46 files...
Done.


Merging files...

Checksum keywords updated successfully.

Merged file saved to:
/scratch/kocevski/991376/ft1_4FGL_J1139.0+4033_daily_bin1580.fits


Retrieving the FT1 file...

Issuing command:
/afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT2 --filter 'nMetStop>=648864001.0 && nMetStart<649123201.0' /Data/Flight/Level1/LPA

Retrieving 46 files...
Done.


Merging files...

Merged file saved to:
/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits


Selecting the photons:
time -p gtselect infile=/scratch/kocevski/991376/ft1_4FGL_J1139.0+4033_daily_bin1580.fits outfile=/scratch/kocevski/991376/ft1_filteredMKT_4FGL_J1139.0+4033_daily_bin1580.fits ra=174.764 dec=40.5617 rad=12.0 tmin=648864001.0 tmax=649123201.0 emin=100.0 emax=100000.0 zmin=0.0 zmax=90.0 evclass=128 evtype="INDEF" convtype=-1 phasemin=0.0 phasemax=1.0 evtable="EVENTS" chatter=2 clobber=yes debug=no gui=no mode="ql"

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

Done.
real 3.09
user 2.83
sys 0.20

Adding sun position to ft2 file:
/nfs/farm/g/glast/g/LCRepository/Repository/bin/sunpos /scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits

Selecting the good time intervals:
time -p gtmktime scfile=/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits sctable="SC_DATA" filter="IN_SAA!=T && LIVETIME>0 && gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nogrb.gti',(START+STOP)/2) && (angsep(RA_SUN,DEC_SUN,RA_ZENITH,DEC_ZENITH)>115 || gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nosolarflares.gti',(START+STOP)/2))" roicut=no evfile=/scratch/kocevski/991376/ft1_filteredMKT_4FGL_J1139.0+4033_daily_bin1580.fits evtable="EVENTS" outfile="/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits" apply_filter=yes overwrite=yes header_obstimes=yes tstart=0.0 tstop=0.0 gtifile="default" chatter=3 clobber=yes debug=no gui=no mode="ql"

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

This is gtmktime version HEAD
Applying GTI filter:
IN_SAA!=T && LIVETIME>0 && gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nogrb.gti',(START+STOP)/2) && (angsep(RA_SUN,DEC_SUN,RA_ZENITH,DEC_ZENITH)>115 || gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nosolarflares.gti',(START+STOP)/2))
real 0.51
user 0.33
sys 0.15

Generating the livetime cube:
time -p gtltcube evfile="/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits" evtable="EVENTS" scfile=/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits sctable="SC_DATA" outfile=/scratch/kocevski/991376/ltcube_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits dcostheta=0.025 binsz=1.0 phibins=0 tmin=0.0 tmax=0.0 file_version="1" zmin=0.0 zmax=90.0 chatter=2 clobber=yes debug=no gui=no mode="ql"

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

Working on file /scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits
.....................!
real 12.36
user 11.95
sys 0.36

Generating the exposure map:
time -p gtexpmap evfile=/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits evtable="EVENTS" scfile=/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits sctable="SC_DATA" expcube=/scratch/kocevski/991376/ltcube_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits outfile=/scratch/kocevski/991376/expmap_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits irfs="P8R3_SOURCE_V2" evtype="INDEF" srcrad=30.0 nlong=88 nlat=88 nenergies=10 submap=no nlongmin=0 nlongmax=0 nlatmin=0 nlatmax=0 chatter=2 clobber=yes debug=no gui=no mode="ql"

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

The exposure maps generated by this tool are meant
to be used for *unbinned* likelihood analysis only.
Do not use them for binned analyses.
Computing the ExposureMap using /scratch/kocevski/991376/ltcube_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits
.....................!
real 190.16
user 184.70
sys 5.09

Generating the xml model:
radLim = 0.001
maxRad = 12
normsOnly = True
freeVariableSources = True
Fixing all sources to their catalog values, except variable sources
Creating file and adding sources from 4FGL
Added 219 point sources and 0 extended sources

Setting source of interest to:
4FGL J1139.0+4033 @ 174.764 40.5617

Creating the counts map:
time -p gtbin evfile=/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits scfile=/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits outfile=/scratch/kocevski/991376/cmap_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits algorithm="CMAP" ebinalg="LOG" emin=30.0 emax=200000.0 ebinfile=NONE tbinalg="LIN" tbinfile=NONE nxpix=160 nypix=160 binsz=0.25 coordsys="CEL" xref=174.764 yref=40.5617 axisrot=0.0 rafield="RA" decfield="DEC" proj="AIT" hpx_ordering_scheme="RING" hpx_order=3 hpx_ebin=yes hpx_region="" evtable="EVENTS" sctable="SC_DATA" efield="ENERGY" tfield="TIME" chatter=2 clobber=yes debug=no gui=no mode="ql"

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

This is gtbin version HEAD
real 0.54
user 0.36
sys 0.16

Creating the high resolution counts map:
time -p gtbin evfile=/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits scfile=/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits outfile=/scratch/kocevski/991376/cmap_HighResolution_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits algorithm="CMAP" ebinalg="LOG" emin=30.0 emax=200000.0 ebinfile=NONE tbinalg="LIN" tbinfile=NONE nxpix=500 nypix=500 binsz=0.1 coordsys="CEL" xref=174.764 yref=40.5617 axisrot=0.0 rafield="RA" decfield="DEC" proj="AIT" hpx_ordering_scheme="RING" hpx_order=3 hpx_ebin=yes hpx_region="" evtable="EVENTS" sctable="SC_DATA" efield="ENERGY" tfield="TIME" chatter=2 clobber=yes debug=no gui=no mode="ql"

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

This is gtbin version HEAD
real 0.57
user 0.38
sys 0.15

Computing the diffuse response:
time -p gtdiffrsp evfile=/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits evtable="EVENTS" scfile=/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits sctable="SC_DATA" srcmdl=/scratch/kocevski/991376/Model_4FGL_J1139.0+4033_daily_bin1580.xml irfs="P8R3_SOURCE_V2" evclsmin=0 evclass="INDEF" evtype="INDEF" convert=yes chatter=2 clobber=yes debug=no gui=no mode="ql"

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

adding source EG_v02
adding source GAL_V02
Working on...
/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits.....................!
real 59.16
user 57.65
sys 1.21

Creating the likelihood object...
obs = UnbinnedObs('/scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits', '/scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits', expMap='/scratch/kocevski/991376/expmap_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits', expCube='/scratch/kocevski/991376/ltcube_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits', irfs='P8R3_SOURCE_V2')
like = UnbinnedAnalysis(obs, '/scratch/kocevski/991376/Model_4FGL_J1139.0+4033_daily_bin1580.xml', optimizer='MINUIT')

Using source of interest name: '4FGL J1139.0+4033'

4FGL J1139.0+4033
   Spectrum: PowerLaw
341    Prefactor:  9.736e+00  0.000e+00  1.000e-04  1.000e+04 ( 1.000e-13)
342        Index:  2.720e+00  0.000e+00  0.000e+00  1.000e+01 (-1.000e+00) fixed
343        Scale:  6.779e+02  0.000e+00  3.000e+01  5.000e+05 ( 1.000e+00) fixed


Likelihood Fit Parameters:
Event file(s): /scratch/kocevski/991376/ft1_filtered_4FGL_J1139.0+4033_daily_bin1580.fits
Spacecraft file(s): /scratch/kocevski/991376/ft2_4FGL_J1139.0+4033_daily_bin1580.fits
Exposure map: /scratch/kocevski/991376/expmap_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits
Exposure cube: /scratch/kocevski/991376/ltcube_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.fits
IRFs: P8R3_SOURCE_V2
Source model file: /scratch/kocevski/991376/Model_4FGL_J1139.0+4033_daily_bin1580.xml
Optimizer: MINUIT
Statistic: UNBINNED

Performing an iterative likelihood fit...

Fit tolerance = 1

Performing likelihood fit...
Done.

MINUIT Return Code (Fixed Index): 0
logL (Fixed Index) = 7391.43547317

Fit tolerance = 0.0001

Performing likelihood fit...
Done.

MINUIT Return Code (Fixed Index): 0
logL (Fixed Index) = 7391.42122185

Fit tolerance = 1e-08

Performing likelihood fit...
 **********
 **   14 **SET NOWARN 
 **********

 PARAMETER DEFINITIONS:
    NO.   NAME         VALUE      STEP SIZE      LIMITS
     1 'Prefactor '    8.8262       1.0000         .10000E-03   10000.    
     2 'Prefactor '    .10003E-03   1.0000         .10000E-03   10000.    
     3 'norm      '    1.7258       1.0000         .10000E-03   10000.    
     4 'Prefactor '    22.238       1.0000         .10000E-03   10000.    
     5 'Prefactor '    .10002E-03   1.0000         .10000E-03   10000.    
     6 'Prefactor '    .10003E-03   1.0000         .10000E-03   10000.    
     7 'norm      '    .10000E-03   1.0000         .10000E-03   10000.    
     8 'norm      '    63.148       1.0000         .10000E-03   10000.    
     9 'Prefactor '    .10001E-03   1.0000         .10000E-03   10000.    
    10 'Prefactor '    .10000E-03   1.0000         .10000E-03   10000.    
    11 'Prefactor '    .10001E-03   1.0000         .10000E-03   10000.    
    12 'norm      '    1.1880       1.0000         .10000E-03   10000.    
    13 'Prefactor '    .10037E-03   1.0000         .10000E-03   10000.    
    14 'Prefactor '    7.1146       1.0000         .10000E-03   10000.    
    15 'Prefactor '    .10000E-03   1.0000         .10000E-03   10000.    
    16 'norm      '    2.4071       1.0000         .10000E-03   10000.    
    17 'norm      '    .10001E-03   1.0000         .10000E-03   10000.    
    18 'Prefactor '    .10006E-03   1.0000         .10000E-03   10000.    
    19 'Prefactor '    .10000E-03   1.0000         .10000E-03   10000.    
    20 'Prefactor '    .10013E-03   1.0000         .10000E-03   10000.    
    21 'Prefactor '    5.2079       1.0000         .10000E-03   10000.    
    22 'Prefactor '    .10000E-03   1.0000         .10000E-03   10000.    
    23 'Prefactor '    2.4951       1.0000         .10000E-03   10000.    
    24 'Normalizat'    1.1101       1.0000         .10000E-01   10.000    
    25 'Prefactor '    1.1174       1.0000          .0000       10.000    
 **********
 **   15 **SET ERR    .5000    
 **********
 **********
 **   16 **SET GRAD    1.000    
 **********
 **********
 **   17 **MINIMIZE    .6960E+05   .2000E-04
 **********

 MIGRAD MINIMIZATION HAS CONVERGED.

 MIGRAD WILL VERIFY CONVERGENCE AND ERROR MATRIX.

 MIGRAD MINIMIZATION HAS CONVERGED.

 FCN=   7391.421     FROM MIGRAD    STATUS=CONVERGED    554 CALLS     2858 TOTAL
                     EDM=   .49E-09  STRATEGY=1  ERROR MATRIX UNCERTAINTY=   .3%

  EXT PARAMETER                                   STEP         FIRST   
  NO.   NAME        VALUE          ERROR          SIZE      DERIVATIVE 
   1  Prefactor     8.7955        27.051       -.40491E-04   -.97749E-05
   2  Prefactor     .10000E-03    49.354       -.14490E-04** at limit **
   3  norm          1.7258        .39635        .81824E-08   -.10930E-03
   4  Prefactor     22.240        16.012        .45409E-07   -.54552E-04
   5  Prefactor     .10000E-03    17.912        .39232E-05** at limit **
   6  Prefactor     .10000E-03    30.508        .63469E-05** at limit **
   7  norm          .10000E-03    3.9976        .36269E-07** at limit **
   8  norm          63.153        40.135        .41770E-05    .17679E-06
   9  Prefactor     .10000E-03    .86115        .44507E-07** at limit **
  10  Prefactor     .10000E-03    14.260       -.46607E-05** at limit **
  11  Prefactor     .10000E-03    5.9686       -.39883E-07** at limit **
  12  norm          1.1885        2.0677       -.53307E-06   -.12633E-02
  13  Prefactor     .10000E-03    20.093       -.87493E-05** at limit **
  14  Prefactor     7.1145        5.2927        .12929E-05   -.27066E-04
  15  Prefactor     .10000E-03    16.575        .11201E-04** at limit **
  16  norm          2.4070        1.0382       -.55514E-07   -.73918E-03
  17  norm          .10000E-03    4.6246       -.10699E-07** at limit **
  18  Prefactor     .10000E-03    29.392        .33336E-05** at limit **
  19  Prefactor     .10000E-03    1.5380        .67553E-07** at limit **
  20  Prefactor     .10000E-03    41.067        .16180E-04** at limit **
  21  Prefactor     5.2090        11.036       -.46588E-06   -.82387E-04
  22  Prefactor     .10000E-03    22.211       -.12783E-04** at limit **
  23  Prefactor     2.4964        9.7284       -.15711E-05   -.24285E-03
  24  Normalizat    1.1099        .16301       -.56881E-07    .12321E-03
  25  Prefactor     1.1177        .19246        .10459E-05    .13729E-04
                               ERR DEF=  .500    
Final values: 
  Prefactor  = 8.79548
  Prefactor  = 0.0001
  norm       = 1.72582
  Prefactor  = 22.2396
  Prefactor  = 0.0001
  Prefactor  = 0.0001
  norm       = 0.0001
  norm       = 63.1526
  Prefactor  = 0.0001
  Prefactor  = 0.0001
  Prefactor  = 0.0001
  norm       = 1.18847
  Prefactor  = 0.0001
  Prefactor  = 7.11448
  Prefactor  = 0.0001
  norm       = 2.40701
  norm       = 0.0001
  Prefactor  = 0.0001
  Prefactor  = 0.0001
  Prefactor  = 0.0001
  Prefactor  = 5.20902
  Prefactor  = 0.0001
  Prefactor  = 2.49645
  Normalizat = 1.10989
  Prefactor  = 1.11771
 **********
 **   18 **HESSE 
 **********

 FCN=   7391.421     FROM HESSE     STATUS=OK           421 CALLS     3279 TOTAL
                     EDM=   .98E-09    STRATEGY= 1      ERROR MATRIX ACCURATE 

  EXT PARAMETER                                INTERNAL      INTERNAL  
  NO.   NAME        VALUE          ERROR       STEP SIZE       VALUE   
   1  Prefactor     8.7955        27.058        .13492E-03   -1.5115    
   2  Prefactor     .10000E-03    49.393        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
   3  norm          1.7258        .39764        .24636E-04   -1.5445    
   4  Prefactor     22.240        16.025        .84938E-04   -1.4764    
   5  Prefactor     .10000E-03    18.096        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
   6  Prefactor     .10000E-03    30.512        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
   7  norm          .10000E-03    4.0003        .16786E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
   8  norm          63.153        40.130        .50498E-04   -1.4117    
   9  Prefactor     .10000E-03    .86870        .77821E-03   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  10  Prefactor     .10000E-03    14.260        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  11  Prefactor     .10000E-03    5.9791        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  12  norm          1.1885        2.0402        .15566E-03   -1.5490    
  13  Prefactor     .10000E-03    20.591        .36285E-03   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  14  Prefactor     7.1145        5.2917        .15039E-03   -1.5174    
  15  Prefactor     .10000E-03    16.590        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  16  norm          2.4070        1.0380        .26388E-04   -1.5398    
  17  norm          .10000E-03    4.6733        .18055E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  18  Prefactor     .10000E-03    29.657        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  19  Prefactor     .10000E-03    1.5886        .20791E-03   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  20  Prefactor     .10000E-03    41.195        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  21  Prefactor     5.2090        11.032        .17615E-03   -1.5251    
  22  Prefactor     .10000E-03    22.270        .18142E-02   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
  23  Prefactor     2.4964        9.7465        .25875E-03   -1.5392    
  24  Normalizat    1.1099        .19588        .24451E-03   -.89435    
  25  Prefactor     1.1177        .23062        .29608E-03   -.88903    
                               ERR DEF=  .500    
Minuit fit quality: 3   estimated distance: 9.79607e-10
Minuit parameter uncertainties:
  1  27.0955
  2  2.6202e-05
  3  0.397644
  4  16.0277
  5  2.54352e-05
  6  8.59017e-06
  7  2.09294e-06
  8  40.147
  9  1.99647e-06
  10  3.22118e-06
  11  1.65483e-06
  12  2.04027
  13  1.63548e-05
  14  5.29209
  15  3.28156e-06
  16  1.03797
  17  3.40474e-06
  18  9.02908e-05
  19  2.64759e-06
  20  5.39879e-05
  21  11.0363
  22  1.83331e-05
  23  9.75272
  24  0.196004
  25  0.230827
Done.

MINUIT Return Code (Fixed Index): 0
logL (Fixed Index) = 7391.42122025

Extracting fit parameters...

4FGL J1139.0+4033
   Spectrum: PowerLaw
341    Prefactor:  1.000e-04  3.282e-06  1.000e-04  1.000e+04 ( 1.000e-13)
342        Index:  2.720e+00  0.000e+00  0.000e+00  1.000e+01 (-1.000e+00) fixed
343        Scale:  6.779e+02  0.000e+00  3.000e+01  5.000e+05 ( 1.000e+00) fixed

GAL_V02
   Spectrum: PowerLaw
693    Prefactor:  1.118e+00  2.308e-01  0.000e+00  1.000e+01 ( 1.000e+00)
694        Index:  0.000e+00  0.000e+00 -1.000e+00  1.000e+00 ( 1.000e+00) fixed
695        Scale:  1.000e+02  0.000e+00  5.000e+01  2.000e+02 ( 1.000e+00) fixed

EG_v02
   Spectrum: FileFunction
692   Normalization:  1.110e+00  1.960e-01  1.000e-02  1.000e+01 ( 1.000e+00)


TS (Fixed Index): -0.00
Ra Dec: 174.764 40.562
Photon Flux Upper Limit: 6.53e-08 ph cm-2 s-1
Energy Flux Upper Limit: 5.14e-03 MeV cm-2 s-1

Saving results to:
/scratch/kocevski/991376/likelihoodResults_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.txt

Performing a free index iterative likelihood fit...

Freezing all point sources, except source of interest...

Done.

Freeing candidate source...
Done.

Fit tolerance = 1

Performing likelihood fit...
Done.

MINUIT Return Code (Free Index): 102
logL (Free Index) = 7391.42150739
delta logL = -0.000287135853796

Fit tolerance = 0.0001

Performing likelihood fit...
Done.

MINUIT Return Code (Free Index): 102
logL (Free Index) = 7391.42122233
delta logL = -2.07952143683e-06

Fit tolerance = 1e-08

Performing likelihood fit...
 **********
 **   14 **SET NOWARN 
 **********

 PARAMETER DEFINITIONS:
    NO.   NAME         VALUE      STEP SIZE      LIMITS
     1 'Prefactor '    .11139E-03   1.0000         .10000E-03   10000.    
     2 'Index     '    3.6341       1.0000          .0000       10.000    
     3 'Normalizat'    1.1099       1.0000         .10000E-01   10.000    
     4 'Prefactor '    1.1177       1.0000          .0000       10.000    
 **********
 **   15 **SET ERR    .5000    
 **********
 **********
 **   16 **SET GRAD    1.000    
 **********
 **********
 **   17 **MINIMIZE    .6960E+05   .2000E-04
 **********

 MIGRAD MINIMIZATION HAS CONVERGED.

 MIGRAD WILL VERIFY CONVERGENCE AND ERROR MATRIX.

 MIGRAD MINIMIZATION HAS CONVERGED.

 MIGRAD WILL VERIFY CONVERGENCE AND ERROR MATRIX.

 FCN=   7391.421     FROM MIGRAD    STATUS=CONVERGED     95 CALLS      288 TOTAL
                     EDM=   .18E-08    STRATEGY= 1      ERR MATRIX NOT POS-DEF

  EXT PARAMETER                APPROXIMATE        STEP         FIRST   
  NO.   NAME        VALUE          ERROR          SIZE      DERIVATIVE 
   1  Prefactor     .10485E-03    3.9508        .18142E-01** at limit **
   2  Index         3.4617        5.5101        .50000        .12538E-04
   3  Normalizat    1.1099        .23524E-02    .24451E-03    .38313E-04
   4  Prefactor     1.1177        .28692E-02    .29608E-03    .94457E-05
                               ERR DEF=  .500    
Final values: 
  Prefactor  = 0.000104854
  Index      = 3.46166
  Normalizat = 1.10989
  Prefactor  = 1.11771
 **********
 **   18 **HESSE 
 **********

 FCN=   7391.421     FROM HESSE     STATUS=NOT POSDEF    29 CALLS      317 TOTAL
                     EDM=   .19E-06    STRATEGY= 1      ERR MATRIX NOT POS-DEF

  EXT PARAMETER                APPROXIMATE     INTERNAL      INTERNAL  
  NO.   NAME        VALUE          ERROR       STEP SIZE       VALUE   
   1  Prefactor     .10485E-03    547.25        .57704E-03   -1.5708    
                                 WARNING -   - ABOVE PARAMETER IS AT LIMIT.
   2  Index         3.4617        8.2649        .50000       -.31274    
   3  Normalizat    1.1099        .28868E-01    .97804E-05   -.89435    
   4  Prefactor     1.1177        .35205E-01    .11843E-04   -.88903    
                               ERR DEF=  .500    
Minuit fit quality: 2   estimated distance: 1.88556e-07
Minuit parameter uncertainties:
  1  0.104048
  2  1754.95
  3  0.0288685
  4  0.0352053
shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory
rmdir: failed to remove `/scratch/kocevski/991376': No such file or directory
shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory
Done.

MINUIT Return Code (Free Index): 102
logL (Free Index) = 7391.42122152
delta logL = -1.26452141558e-06

Extracting fit parameters...

4FGL J1139.0+4033
   Spectrum: PowerLaw
341    Prefactor:  1.049e-04  1.040e-01  1.000e-04  1.000e+04 ( 1.000e-13)
342        Index:  3.462e+00  1.755e+03  0.000e+00  1.000e+01 (-1.000e+00)
343        Scale:  6.779e+02  0.000e+00  3.000e+01  5.000e+05 ( 1.000e+00) fixed

GAL_V02
   Spectrum: PowerLaw
693    Prefactor:  1.118e+00  3.521e-02  0.000e+00  1.000e+01 ( 1.000e+00)
694        Index:  0.000e+00  0.000e+00 -1.000e+00  1.000e+00 ( 1.000e+00) fixed
695        Scale:  1.000e+02  0.000e+00  5.000e+01  2.000e+02 ( 1.000e+00) fixed

EG_v02
   Spectrum: FileFunction
692   Normalization:  1.110e+00  2.887e-02  1.000e-02  1.000e+01 ( 1.000e+00)


TS (Free Index): -0.00
Ra Dec: 174.764 40.562

Creating a high resolution counts map...
INFO: Auto-setting vmin to -1.000e-01 [aplpy.core]
INFO: Auto-setting vmax to  1.110e+00 [aplpy.core]
Saving /scratch/kocevski/991376/cmap_HighResolution_648864001_649123201_4FGL_J1139.0+4033_daily_bin1580.png

Cleaning up...

** Nuclear option initiated! **
rmdir /scratch/kocevski/991376

Updating database...

UPDATE lightcurve_data_v2 SET energy_flux_upper_limit='5.14e-03', job_status='DONE', photon_flux_upper_limit='6.53e-08', time_completed='2021-09-04 07:32:12.965964', job_id='991376', GAL2='1.12', fit_tolerance='1e-08', EG2='1.11', EG='1.11', time_epoch_completed='1630765932.97', return_code2='102', ts='-0.00', comment='SUCCESS', return_code='0', GAL='1.12', dlogl='-1.26e-06', ts2='-0.00', photon_index_error='0.00', photon_index='2.72' WHERE bin_id='1580' AND source_name='4FGL J1139.0+4033' AND cadence='daily';

Database successfully updated.


Analysis Complete.


Sat Sep  4 07:32:12 PDT 2021


------------------------------------------------------------
Sender: LSF System <lsf@bullet0236>
Subject: Job 991376: <4FGL_J1139.0+4033_daily_bin1580> in cluster <slac> Done

Job <4FGL_J1139.0+4033_daily_bin1580> was submitted from host <rhel6-64a> by user <kocevski> in cluster <slac> at Sat Sep  4 07:17:10 2021
Job was executed on host(s) <bullet0236>, in queue <medium>, as user <kocevski> in cluster <slac> at Sat Sep  4 07:17:12 2021
</u/ki/kocevski> was used as the home directory.
</u/ki/kocevski> was used as the working directory.
Started at Sat Sep  4 07:17:12 2021
Terminated at Sat Sep  4 07:32:13 2021
Results reported at Sat Sep  4 07:32:13 2021

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
/nfs/farm/g/glast/g/LCRepository/Likelihood/Scripts/LikelihoodAnalysis.py 4FGL_J1139.0+4033_daily_bin1580 174.764 40.5617 648864001 649123201 irfs=P8R3_SOURCE_V2 zmax=90 ROI=12 association=4FGL_J1139.0+4033 fixedModel=True performFreeIndexFit=True freeVariableSources=True nuke=True repositoryJob=True verbose=False
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time :                                   875.00 sec.
    Max Memory :                                 1257 MB
    Average Memory :                             363.66 MB
    Total Requested Memory :                     -
    Delta Memory :                               -
    Max Swap :                                   -
    Max Processes :                              5
    Max Threads :                                21
    Run time :                                   901 sec.
    Turnaround time :                            903 sec.

The output (if any) is above this job summary.

