aklog: Couldn't determine realm of user:aklog: No credentials cache found while getting realm /nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/pyfits/__init__.py:22: PyFITSDeprecationWarning: PyFITS is deprecated, please use astropy.io.fits PyFITSDeprecationWarning) # noqa Likelihood Analysis Tool Support Contact: Daniel Kocevski (daniel.kocevski@nasa.gov) Waiting 224 seconds before starting... Proceeding. Importing modules... This is make3FGLxml version 01r0. The default diffuse model files and names are for pass 8 and assume you have v10r00p05 of the Fermi Science Tools or higher. This is make4FGLDR3xml version 01r09. The default diffuse model files and names are for P8R3, 4FGL DRs, and the default fermitools directory locations. WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). /nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/matplotlib/cbook/deprecation.py:106: MatplotlibDeprecationWarning: The mpl_toolkits.axes_grid module was deprecated in version 2.1. Use mpl_toolkits.axes_grid1 and mpl_toolkits.axisartist provies the same functionality instead. warnings.warn(message, mplDeprecation, stacklevel=1) WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). number of points = 7448 number of fields = 31 RA_SUN column already exists. File will not be modified. shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory rmdir: failed to remove `/scratch/kocevski/678866': No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Done. Performing analysis on: 4FGL_J1012.7+2439_daily_bin1774 RA = 153.199, Dec = 24.6638 tmin = 699148801, tmax = 699408001 emin = 100.0, emax = 100000.0 irfs = P8R3_SOURCE_V2 ROI = 12 zmax = 90 Fitting strategies: Fix sources to their catalog values = True Leave variable source normalizations free = True Perform pre-fit where ALL sources are frozen to catalog values = False Perform secondary fit with a free spectral index = True Remove all catalog sources = False Remove weak (TS < 2) catalog sources = False Freeze Galactic component = False Likelihood fit parameters: Statistic: UNBINNED Optimizer: MINUIT Catalog: 4FGL Repository job = True LAT data source: Data catalog Updating database... UPDATE lightcurve_data_v2 SET job_id='678866', job_status='RUN', time_executed='2023-03-02 00:34:20.789048', time_epoch_executed='1677746060.79' WHERE source_name='4FGL J1012.7+2439' and cadence='daily' and bin_id='1774' Database successfully updated. Done. Creating custom output directory: /scratch/kocevski/678866 Creating custom pfile directory: /scratch/kocevski/678866/pfiles/ Retrieving the FT1 file... Issuing command: /afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStop>=699148801.0 && nMetStart<699408001.0' /Data/Flight/Reprocess/P305 Issuing command: /afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStart>564945418 && nMetStop>=699148801.0 && nMetStart<699408001.0' /Data/Flight/Level1/LPA Retrieving 46 files... Done. Merging files... Checksum keywords updated successfully. Merged file saved to: /scratch/kocevski/678866/ft1_4FGL_J1012.7+2439_daily_bin1774.fits Retrieving the FT1 file... Issuing command: /afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT2 --filter 'nMetStop>=699148801.0 && nMetStart<699408001.0' /Data/Flight/Level1/LPA Retrieving 46 files... Done. Merging files... Merged file saved to: /scratch/kocevski/678866/ft2_4FGL_J1012.7+2439_daily_bin1774.fits Selecting the photons: time -p gtselect infile=/scratch/kocevski/678866/ft1_4FGL_J1012.7+2439_daily_bin1774.fits outfile=/scratch/kocevski/678866/ft1_filteredMKT_4FGL_J1012.7+2439_daily_bin1774.fits ra=153.199 dec=24.6638 rad=12.0 tmin=699148801.0 tmax=699408001.0 emin=100.0 emax=100000.0 zmin=0.0 zmax=90.0 evclass=128 evtype="INDEF" convtype=-1 phasemin=0.0 phasemax=1.0 evtable="EVENTS" chatter=2 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). Done. real 2.79 user 2.59 sys 0.19 No photons survived the gtmktime cut UPDATE lightcurve_data_v2 SET job_status='DONE', comment='No photons survived the gtselect cut', time_epoch_completed='1677746083.09', time_completed='2023-03-02 00:34:43.087835', job_id='678866' WHERE bin_id='1774' AND source_name='4FGL J1012.7+2439' AND cadence='daily'; Database successfully updated. Adding sun position to ft2 file: /nfs/farm/g/glast/g/LCRepository/Repository/bin/sunpos /scratch/kocevski/678866/ft2_4FGL_J1012.7+2439_daily_bin1774.fits Selecting the good time intervals: time -p gtmktime scfile=/scratch/kocevski/678866/ft2_4FGL_J1012.7+2439_daily_bin1774.fits sctable="SC_DATA" filter="IN_SAA!=T && LIVETIME>0 && gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nogrb.gti',(START+STOP)/2) && (angsep(RA_SUN,DEC_SUN,RA_ZENITH,DEC_ZENITH)>115 || gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nosolarflares.gti',(START+STOP)/2))" roicut=no evfile=/scratch/kocevski/678866/ft1_filteredMKT_4FGL_J1012.7+2439_daily_bin1774.fits evtable="EVENTS" outfile="/scratch/kocevski/678866/ft1_filtered_4FGL_J1012.7+2439_daily_bin1774.fits" apply_filter=yes overwrite=yes header_obstimes=yes tstart=0.0 tstop=0.0 gtifile="default" chatter=3 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). This is gtmktime version HEAD Applying GTI filter: IN_SAA!=T && LIVETIME>0 && gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nogrb.gti',(START+STOP)/2) && (angsep(RA_SUN,DEC_SUN,RA_ZENITH,DEC_ZENITH)>115 || gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nosolarflares.gti',(START+STOP)/2)) real 0.48 user 0.33 sys 0.15 No photons survived the gtmktime cut UPDATE lightcurve_data_v2 SET job_status='DONE', comment='No photons survived the gtmktime cut', time_epoch_completed='1677746083.62', time_completed='2023-03-02 00:34:43.620625', job_id='678866' WHERE bin_id='1774' AND source_name='4FGL J1012.7+2439' AND cadence='daily'; Database successfully updated. Generating the livetime cube: time -p gtltcube evfile="/scratch/kocevski/678866/ft1_filtered_4FGL_J1012.7+2439_daily_bin1774.fits" evtable="EVENTS" scfile=/scratch/kocevski/678866/ft2_4FGL_J1012.7+2439_daily_bin1774.fits sctable="SC_DATA" outfile=/scratch/kocevski/678866/ltcube_699148801_699408001_4FGL_J1012.7+2439_daily_bin1774.fits dcostheta=0.025 binsz=1.0 phibins=0 tmin=0.0 tmax=0.0 file_version="1" zmin=0.0 zmax=90.0 chatter=2 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). Working on file /scratch/kocevski/678866/ft2_4FGL_J1012.7+2439_daily_bin1774.fits .....................! real 12.76 user 12.40 sys 0.32 Generating the exposure map: time -p gtexpmap evfile=/scratch/kocevski/678866/ft1_filtered_4FGL_J1012.7+2439_daily_bin1774.fits evtable="EVENTS" scfile=/scratch/kocevski/678866/ft2_4FGL_J1012.7+2439_daily_bin1774.fits sctable="SC_DATA" expcube=/scratch/kocevski/678866/ltcube_699148801_699408001_4FGL_J1012.7+2439_daily_bin1774.fits outfile=/scratch/kocevski/678866/expmap_699148801_699408001_4FGL_J1012.7+2439_daily_bin1774.fits irfs="P8R3_SOURCE_V2" evtype="INDEF" srcrad=30.0 nlong=88 nlat=88 nenergies=10 submap=no nlongmin=0 nlongmax=0 nlatmin=0 nlatmax=0 chatter=2 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). The exposure maps generated by this tool are meant to be used for *unbinned* likelihood analysis only. Do not use them for binned analyses. Computing the ExposureMap using /scratch/kocevski/678866/ltcube_699148801_699408001_4FGL_J1012.7+2439_daily_bin1774.fits .....................! real 189.34 user 184.63 sys 4.41 Error: could not find cmap file: /scratch/kocevski/678866/cmap_HighResolution_699148801_699408001_4FGL_J1012.7+2439_daily_bin1774.fits Continuing... Cleaning up... ** Nuclear option initiated! ** rmdir /scratch/kocevski/678866 Analysis Complete. Thu Mar 2 00:38:05 PST 2023 ------------------------------------------------------------ Sender: LSF System Subject: Job 678866: <4FGL_J1012.7+2439_daily_bin1774> in cluster Done Job <4FGL_J1012.7+2439_daily_bin1774> was submitted from host by user in cluster at Thu Mar 2 00:30:23 2023 Job was executed on host(s) , in queue , as user in cluster at Thu Mar 2 00:30:23 2023 was used as the home directory. was used as the working directory. Started at Thu Mar 2 00:30:23 2023 Terminated at Thu Mar 2 00:38:06 2023 Results reported at Thu Mar 2 00:38:06 2023 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input /nfs/farm/g/glast/g/LCRepository/Likelihood/Scripts/LikelihoodAnalysis.py 4FGL_J1012.7+2439_daily_bin1774 153.199 24.6638 699148801 699408001 irfs=P8R3_SOURCE_V2 zmax=90 ROI=12 association=4FGL_J1012.7+2439 fixedModel=True performFreeIndexFit=True freeVariableSources=True nuke=True repositoryJob=True verbose=False ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 227.40 sec. Max Memory : 321 MB Average Memory : 152.25 MB Total Requested Memory : - Delta Memory : - Max Swap : 2619 MB Max Processes : 6 Max Threads : 21 Run time : 463 sec. Turnaround time : 463 sec. The output (if any) is above this job summary.