/nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/pyfits/__init__.py:22: PyFITSDeprecationWarning: PyFITS is deprecated, please use astropy.io.fits
  PyFITSDeprecationWarning)  # noqa

Likelihood Analysis Tool
Support Contact: Daniel Kocevski (daniel.kocevski@nasa.gov)


Waiting 95 seconds before starting...
Proceeding.

Importing modules...
This is make3FGLxml version 01r0.
The default diffuse model files and names are for pass 8 and assume you have v10r00p05 of the Fermi Science Tools or higher.
This is make4FGLxml version 01r04.
The default diffuse model files and names are for pass 8 and 4FGL and assume you have v11r5p3 of the Fermi Science Tools or higher.

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

/nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/matplotlib/cbook/deprecation.py:106: MatplotlibDeprecationWarning: The mpl_toolkits.axes_grid module was deprecated in version 2.1. Use mpl_toolkits.axes_grid1 and mpl_toolkits.axisartist provies the same functionality instead.
  warnings.warn(message, mplDeprecation, stacklevel=1)

WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41).

shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory
rmdir: failed to remove `/scratch/kocevski/394259': No such file or directory
shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory
Done.


Performing analysis on: 4FGL_J0422.1-0644_daily_bin74
RA = 65.5343, Dec = -6.741
tmin = 258508801, tmax = 258768001
emin = 100.0, emax = 100000.0
irfs = P8R3_SOURCE_V2
ROI = 12
zmax = 90

Fitting strategies:
Fix sources to their catalog values = True
Leave variable source normalizations free = True
Perform pre-fit where ALL sources are frozen to catalog values = False
Perform secondary fit with a free spectral index = True
Remove all catalog sources = False
Remove weak (TS < 2) catalog sources = False
Freeze Galactic component = False

Likelihood fit parameters:
Statistic: UNBINNED
Optimizer: MINUIT

Catalog: 4FGL

Repository Job = True

LAT data Source:
Data catalog

Updating database...

UPDATE lightcurve_data_v2 SET job_id='394259', job_status='RUN', time_executed='2021-08-20 12:43:37.701711', time_epoch_executed='1629488617.7' WHERE source_name='4FGL J0422.1-0644' and cadence='daily' and bin_id='74'

Database successfully updated.
Done.

Creating custom output directory:
/scratch/kocevski/394259

Creating custom pfile directory:
/scratch/kocevski/394259/pfiles/

Retrieving the FT1 file...

Issuing command:
/afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStop>=258508801.0 && nMetStart<258768001.0' /Data/Flight/Reprocess/P305

Issuing command:
/afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStart>564945418 && nMetStop>=258508801.0 && nMetStart<258768001.0' /Data/Flight/Level1/LPA

No available data


Retrieving the FT1 file...

Issuing command:
/afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT2 --filter 'nMetStop>=258508801.0 && nMetStart<258768001.0' /Data/Flight/Level1/LPA

Retrieving 4 files...
Done.


Merging files...

Merged file saved to:
/scratch/kocevski/394259/ft2_4FGL_J0422.1-0644_daily_bin74.fits


UPDATE lightcurve_data_v2 SET job_status='DONE', comment='No available data', time_epoch_completed='1629488625.05', time_completed='2021-08-20 12:43:45.045033', job_id='394259' WHERE bin_id='74' AND source_name='4FGL J0422.1-0644' AND cadence='daily';

Database successfully updated.

Error: could not find cmap file: /scratch/kocevski/394259/cmap_HighResolution_258508801_258768001_4FGL_J0422.1-0644_daily_bin74.fits
Continuing... 

Cleaning up...

** Nuclear option initiated! **
rmdir /scratch/kocevski/394259


Analysis Complete.


Fri Aug 20 12:43:45 PDT 2021


------------------------------------------------------------
Sender: LSF System <lsf@bullet0070>
Subject: Job 394259: <4FGL_J0422.1-0644_daily_bin74> in cluster <slac> Done

Job <4FGL_J0422.1-0644_daily_bin74> was submitted from host <rhel6-64e> by user <kocevski> in cluster <slac> at Fri Aug 20 12:40:32 2021
Job was executed on host(s) <bullet0070>, in queue <medium>, as user <kocevski> in cluster <slac> at Fri Aug 20 12:40:33 2021
</u/ki/kocevski> was used as the home directory.
</u/ki/kocevski> was used as the working directory.
Started at Fri Aug 20 12:40:33 2021
Terminated at Fri Aug 20 12:43:46 2021
Results reported at Fri Aug 20 12:43:46 2021

Your job looked like:

------------------------------------------------------------
# LSBATCH: User input
/nfs/farm/g/glast/g/LCRepository/Likelihood/Scripts/LikelihoodAnalysis.py 4FGL_J0422.1-0644_daily_bin74 65.5343 -6.741 258508801 258768001 irfs=P8R3_SOURCE_V2 zmax=90 ROI=12 association=4FGL_J0422.1-0644 fixedModel=True performFreeIndexFit=True freeVariableSources=True nuke=True repositoryJob=True verbose=False
------------------------------------------------------------

Successfully completed.

Resource usage summary:

    CPU time :                                   90.30 sec.
    Max Memory :                                 80 MB
    Average Memory :                             44.43 MB
    Total Requested Memory :                     -
    Delta Memory :                               -
    Max Swap :                                   -
    Max Processes :                              4
    Max Threads :                                19
    Run time :                                   192 sec.
    Turnaround time :                            194 sec.

The output (if any) is above this job summary.

