/nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/pyfits/__init__.py:22: PyFITSDeprecationWarning: PyFITS is deprecated, please use astropy.io.fits PyFITSDeprecationWarning) # noqa Likelihood Analysis Tool Support Contact: Daniel Kocevski (daniel.kocevski@nasa.gov) Waiting 1 seconds before starting... Proceeding. Importing modules... This is make3FGLxml version 01r0. The default diffuse model files and names are for pass 8 and assume you have v10r00p05 of the Fermi Science Tools or higher. This is make4FGLxml version 01r04. The default diffuse model files and names are for pass 8 and 4FGL and assume you have v11r5p3 of the Fermi Science Tools or higher. WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). /nfs/farm/g/glast/g/LCRepository/bin/miniconda2/envs/fermitools_v1.0.5/lib/python2.7/site-packages/matplotlib/cbook/deprecation.py:106: MatplotlibDeprecationWarning: The mpl_toolkits.axes_grid module was deprecated in version 2.1. Use mpl_toolkits.axes_grid1 and mpl_toolkits.axisartist provies the same functionality instead. warnings.warn(message, mplDeprecation, stacklevel=1) WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). number of points = 4900 number of fields = 30 RA_SUN column already exists. File will not be modified. shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory rmdir: failed to remove `/scratch/kocevski/110452': No such file or directory shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such file or directory Done. Performing analysis on: 4FGL_J0205.7+6449_daily_bin1177 RA = 31.4273, Dec = 64.8239 tmin = 544406401, tmax = 544665601 emin = 100.0, emax = 100000.0 irfs = P8R3_SOURCE_V2 ROI = 12 zmax = 90 Fitting strategies: Fix sources to their catalog values = True Leave variable source normalizations free = True Perform pre-fit where ALL sources are frozen to catalog values = False Perform secondary fit with a free spectral index = True Remove all catalog sources = False Remove weak (TS < 2) catalog sources = False Freeze Galactic component = False Likelihood fit parameters: Statistic: UNBINNED Optimizer: MINUIT Catalog: 4FGL Repository Job = True LAT data Source: Data catalog Updating database... UPDATE lightcurve_data_v2 SET job_id='110452', job_status='RUN', time_executed='2021-08-15 06:59:06.043072', time_epoch_executed='1629035946.04' WHERE source_name='4FGL J0205.7+6449' and cadence='daily' and bin_id='1177' Database successfully updated. Done. Creating custom output directory: /scratch/kocevski/110452 Creating custom pfile directory: /scratch/kocevski/110452/pfiles/ Retrieving the FT1 file... Issuing command: /afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStop>=544406401.0 && nMetStart<544665601.0' /Data/Flight/Reprocess/P305 Issuing command: /afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT1 --filter 'nMetStart>564945418 && nMetStop>=544406401.0 && nMetStart<544665601.0' /Data/Flight/Level1/LPA Retrieving 36 files... Done. Merging files... Checksum keywords updated successfully. Merged file saved to: /scratch/kocevski/110452/ft1_4FGL_J0205.7+6449_daily_bin1177.fits Retrieving the FT1 file... Issuing command: /afs/slac.stanford.edu/g/glast/ground/bin/datacat find --group FT2 --filter 'nMetStop>=544406401.0 && nMetStart<544665601.0' /Data/Flight/Level1/LPA Retrieving 36 files... Done. Merging files... Merged file saved to: /scratch/kocevski/110452/ft2_4FGL_J0205.7+6449_daily_bin1177.fits Selecting the photons: time -p gtselect infile=/scratch/kocevski/110452/ft1_4FGL_J0205.7+6449_daily_bin1177.fits outfile=/scratch/kocevski/110452/ft1_filteredMKT_4FGL_J0205.7+6449_daily_bin1177.fits ra=31.4273 dec=64.8239 rad=12.0 tmin=544406401.0 tmax=544665601.0 emin=100.0 emax=100000.0 zmin=0.0 zmax=90.0 evclass=128 evtype="INDEF" convtype=-1 phasemin=0.0 phasemax=1.0 evtable="EVENTS" chatter=2 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). Done. real 11.45 user 7.54 sys 3.61 No photons survived the gtmktime cut UPDATE lightcurve_data_v2 SET job_status='DONE', comment='No photons survived the gtselect cut', time_epoch_completed='1629036021.61', time_completed='2021-08-15 07:00:21.607678', job_id='110452' WHERE bin_id='1177' AND source_name='4FGL J0205.7+6449' AND cadence='daily'; Database successfully updated. Adding sun position to ft2 file: /nfs/farm/g/glast/g/LCRepository/Repository/bin/sunpos /scratch/kocevski/110452/ft2_4FGL_J0205.7+6449_daily_bin1177.fits Selecting the good time intervals: time -p gtmktime scfile=/scratch/kocevski/110452/ft2_4FGL_J0205.7+6449_daily_bin1177.fits sctable="SC_DATA" filter="IN_SAA!=T && LIVETIME>0 && gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nogrb.gti',(START+STOP)/2) && (angsep(RA_SUN,DEC_SUN,RA_ZENITH,DEC_ZENITH)>115 || gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nosolarflares.gti',(START+STOP)/2))" roicut=no evfile=/scratch/kocevski/110452/ft1_filteredMKT_4FGL_J0205.7+6449_daily_bin1177.fits evtable="EVENTS" outfile="/scratch/kocevski/110452/ft1_filtered_4FGL_J0205.7+6449_daily_bin1177.fits" apply_filter=yes overwrite=yes header_obstimes=yes tstart=0.0 tstop=0.0 gtifile="default" chatter=3 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). This is gtmktime version HEAD Applying GTI filter: IN_SAA!=T && LIVETIME>0 && gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nogrb.gti',(START+STOP)/2) && (angsep(RA_SUN,DEC_SUN,RA_ZENITH,DEC_ZENITH)>115 || gtifilter('/nfs/farm/g/glast/g/LCRepository/Likelihood/GTIs/nosolarflares.gti',(START+STOP)/2)) real 3.87 user 0.32 sys 3.47 No photons survived the gtmktime cut UPDATE lightcurve_data_v2 SET job_status='DONE', comment='No photons survived the gtmktime cut', time_epoch_completed='1629036025.65', time_completed='2021-08-15 07:00:25.645844', job_id='110452' WHERE bin_id='1177' AND source_name='4FGL J0205.7+6449' AND cadence='daily'; Database successfully updated. Generating the livetime cube: time -p gtltcube evfile="/scratch/kocevski/110452/ft1_filtered_4FGL_J0205.7+6449_daily_bin1177.fits" evtable="EVENTS" scfile=/scratch/kocevski/110452/ft2_4FGL_J0205.7+6449_daily_bin1177.fits sctable="SC_DATA" outfile=/scratch/kocevski/110452/ltcube_544406401_544665601_4FGL_J0205.7+6449_daily_bin1177.fits dcostheta=0.025 binsz=1.0 phibins=0 tmin=0.0 tmax=0.0 file_version="1" zmin=0.0 zmax=90.0 chatter=2 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). Working on file /scratch/kocevski/110452/ft2_4FGL_J0205.7+6449_daily_bin1177.fits .....................! real 12.49 user 8.08 sys 4.05 Generating the exposure map: time -p gtexpmap evfile=/scratch/kocevski/110452/ft1_filtered_4FGL_J0205.7+6449_daily_bin1177.fits evtable="EVENTS" scfile=/scratch/kocevski/110452/ft2_4FGL_J0205.7+6449_daily_bin1177.fits sctable="SC_DATA" expcube=/scratch/kocevski/110452/ltcube_544406401_544665601_4FGL_J0205.7+6449_daily_bin1177.fits outfile=/scratch/kocevski/110452/expmap_544406401_544665601_4FGL_J0205.7+6449_daily_bin1177.fits irfs="P8R3_SOURCE_V2" evtype="INDEF" srcrad=30.0 nlong=88 nlat=88 nenergies=10 submap=no nlongmin=0 nlongmax=0 nlatmin=0 nlatmax=0 chatter=2 clobber=yes debug=no gui=no mode="ql" WARNING: version mismatch between CFITSIO header (v3.43) and linked library (v3.41). The exposure maps generated by this tool are meant to be used for *unbinned* likelihood analysis only. Do not use them for binned analyses. Computing the ExposureMap using /scratch/kocevski/110452/ltcube_544406401_544665601_4FGL_J0205.7+6449_daily_bin1177.fits .....................! real 196.26 user 185.64 sys 9.67 Error: could not find cmap file: /scratch/kocevski/110452/cmap_HighResolution_544406401_544665601_4FGL_J0205.7+6449_daily_bin1177.fits Continuing... Cleaning up... ** Nuclear option initiated! ** rmdir /scratch/kocevski/110452 Analysis Complete. Sun Aug 15 07:03:54 PDT 2021 ------------------------------------------------------------ Sender: LSF System Subject: Job 110452: <4FGL_J0205.7+6449_daily_bin1177> in cluster Done Job <4FGL_J0205.7+6449_daily_bin1177> was submitted from host by user in cluster at Sun Aug 15 06:55:39 2021 Job was executed on host(s) , in queue , as user in cluster at Sun Aug 15 06:57:57 2021 was used as the home directory. was used as the working directory. Started at Sun Aug 15 06:57:57 2021 Terminated at Sun Aug 15 07:03:56 2021 Results reported at Sun Aug 15 07:03:56 2021 Your job looked like: ------------------------------------------------------------ # LSBATCH: User input /nfs/farm/g/glast/g/LCRepository/Likelihood/Scripts/LikelihoodAnalysis.py 4FGL_J0205.7+6449_daily_bin1177 31.4273 64.8239 544406401 544665601 irfs=P8R3_SOURCE_V2 zmax=90 ROI=12 association=4FGL_J0205.7+6449 fixedModel=True performFreeIndexFit=True freeVariableSources=True nuke=True repositoryJob=True verbose=False ------------------------------------------------------------ Successfully completed. Resource usage summary: CPU time : 334.00 sec. Max Memory : 309 MB Average Memory : 204.69 MB Total Requested Memory : - Delta Memory : - Max Swap : - Max Processes : 5 Max Threads : 21 Run time : 358 sec. Turnaround time : 497 sec. The output (if any) is above this job summary.